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  • Ensembl Genome Browser
    Browse a Genome The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online
  • About the Ensembl Project
    About the Ensembl Project Ensembl is a public and open project providing access to genomes, annotations, tools and methods Its goal is to enable genomic science by providing high-quality, integrated and consistent annotation on all cellular genomes within a harmonious, scalable and accessible infrastructure The Ensembl project was started in 1999, some years before the draft human genome was
  • Homo_sapiens - GRCh37 Archive browser 116 - Ensembl
    Gene annotation What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs More about this genebuild, including RNASeq gene expression models Download genes, cDNAs, ncRNA, proteins (FASTA) Update your old Ensembl IDs
  • Using this website - Ensembl
    Looking for context-sensitive help? Click on the button to get a pop-up help box containing a brief explanation of the page or image you're looking at
  • Accessing Ensembl Data
    Accessing Ensembl Data Ensembl data is available through a number of routes - which you choose depends on the amount and type of data you wish to fetch Please note that Ensembl coordinates always have a one-based start Small quantities of data Many of the pages displaying Ensembl genomic data offer an export option, suitable for small amounts of data, e g a single gene sequence Large
  • Ensembl Variant Effect Predictor (VEP)
    Ensembl VEP predicts the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on gene transcripts and protein sequence, as well as regulatory regions It reports reference data including gene and variant phenotype associations and population allele frequencies to facilitate variant prioritisation and interpretation Simply input the coordinates of your variants
  • Running Ensembl VEP
    To use Ensembl VEP on non-vertebrate species, you need to use extra options: Database access: add the option --genomes to point to the correct database server vep -i input txt -o output txt --species triticum_aestivum --database --genomes Some of the non-vetebrate species databases (mainly bacteria and protists) are composed of a collection of species For these databases the flag " --is
  • Download and install - Ensembl
    To address potential installation challenges with Ensembl VEP dependencies on newer systems, we recommend using Docker or Singularity containers These containerised environments enable to access all the latest Ensembl VEP features without the hassle of installing dependencies directly on your system Additionally, they are highly compatible with computer clusters
  • Help Documentation - Ensembl
    Help Documentation Ensembl GRCh37 release 116 - June 2026 © EMBL-EBI
  • Input form - Ensembl
    Ensembl VEP can also search the Ensembl database for known variants that are co-located with variants from your input data Find co-located known variants - report known variants from the Ensembl Variation database that overlap with your input A list of variant sources imported can be viewed here Note that this feature is only available for species with an Ensembl Variation database





中文字典-英文字典  2005-2009